PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66447.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 170aa    MW: 19452.2 Da    PI: 8.0669
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66447.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.000392264854
                HHHHH.HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  8 rErrR.RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r r R R+ i +++ eLrel+P++     +K s    L k+++++  L
  EPS66447.1 22 RPRPRdRQLIQDRIKELRELVPNS-----EKCSIDGLLDKTIKHMLFL 64
                5555548889*************7.....5666666777777766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.0931564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.3E-52871IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.0E-52872IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
SRLSRSNKRK DCSSSSDNNN QRPRPRDRQL IQDRIKELRE LVPNSEKCSI DGLLDKTIKH  60
MLFLRNVSDR ADKLRKHCCF QEADKMMVEE SGASWAVELG SSSSSSDAQT CPIVVKDLDQ  120
PGQMLIEMLC CDHGRFLEIT NAIHRLQLTV LHGVMEKSPP RESWARFIVE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832038.16e-70PREDICTED: transcription factor LHW-like
SwissprotQ9XIN02e-44LHW_ARATH; Transcription factor LHW
TrEMBLS8E2G41e-123S8E2G4_9LAMI; Prf interactor 30137 (Fragment)
STRINGSolyc09g011170.2.11e-56(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.38e-34conserved peptide upstream open reading frame 7
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]